rs32982386 SNP Detail

Summary

• ID
  rs32982386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3426965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCAGGAG GATTTGTGAG
  TTCAAGGCCA GCTTGAGTTA CATAGTGAGA ACTTGTCTTA AACAAATGAA AATAAATAAA
  CAGGATCATA TACTGGATAG ATTAAGACAT CTTCAATATT TTTCAAAGGT TTATTTATTT
  TTTTATTTTA CATGTATGCT TGTTTACCTG TGTGTAGCTG TCCTATGAGT GCTAGGAATT
  R
  AACCTTGGCC TTCTGGAAGA GCAGCCATCT TAACTACTTG AGCTATTTCT CCAGCCCTGT
  CTAGCTCTTA CTATTGTATT TCTGTGATCC GTCTGTGTTG CTAGCTGATG TACCTTTGTT
  TTTTTTGTTT GTTTGTTTGG TTTGGTTTGG TTTGGTTTGG TTTGGTTTTT TGAGACAGGG
  TTTCTCTGTA TAGCCCTGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45221904	mCV23104877	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146261819	ENSMUSSNP2845675	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss320204514	CHEV_2_3343200	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32982386					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3426965 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11152	CpG island 11152	1514 bp distal
Dclre1c	DNA cross-link repair 1C	within coordinates
Rr367090	regulatory region 367090	1773 bp downstream
Rr550902	regulatory region 550902	1753 bp distal
Rr550903	regulatory region 550903	1460 bp distal
Tssr15890	transcription start site region 15890	1721 bp downstream
Tssr22367	transcription start site region 22367	1904 bp upstream