rs32983379 SNP Detail

Summary

• ID
  rs32983379
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92245741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATATGACA ATAATTTAAG
  TAAAGCCTTA GAAAGTCAGG AAGTGATGAA TGTAGCTACA TGGGAGATTG GTTAAACTGT
  AAGACTAATG GTCTTTCTGT GTATGTGTCT CTGTTTCTCT TTGTCTGACT CAGCTTCTGC
  CCCCCTCTGT GTGTGTGTGT GTGTGTGTGT GTATGTTTGT GTGTGTGTTA ACCACCTAAG
  R
  AAGAACATGT TAAGTATGTT AAGTGCAATT TTAGTTCTGG TACTGTCATG ATAATCTGTC
  TTGAGGTTAT CATCATTGGT GAGTTCCAAT ATATACCTCA AATATGTTCT TTGACATGCA
  GCATTGAAGA ATGTAATGAT AAGACCACAG ACCATTAGTC TCTGCTATGA AGGGCATATA
  ATATTTTCCA AAATTCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46755621	NES10731795	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32983379					SNP	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46755621	NES10731795	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92245741 () rs orientation: forward

Symbol	Name	Function Class
Rr580475	regulatory region 580475	1776 bp distal
Sprr2d	small proline-rich protein 2D	706 bp upstream
Tssr30282	transcription start site region 30282	640 bp upstream
Tssr30283	transcription start site region 30283	698 bp upstream