rs32983503 SNP Detail

Summary

• ID
  rs32983503
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34574862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTCCCAGA TGACTCTAAG TTGTTTCAAG CTGACAGTTA
  GAACTCATCA GGACACTAAC CCTAGAATTT CTACAGACCA TCAAATGATA ATGCATACCA
  S
  AAAGTTCTTA GAGCAAAGTT TATTCCTGGG GCGTCACTGT TCTGACACCA GTATTCTCGA
  TTCTGAGCCG AAAGTTGCCC AGAAACACCC TGTCTCTCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46218881	mCV24922130	ABI	CRAMUS_MOUSE	f	SNP	G	G	G					C		G
ss60592245	NES16320136	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	C	G		G	G	C	C		C	C	C	C		G
ss149092928	ENSMUSSNP545182	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							G
ss322575047	CHEV_8_35170762	CHEVERUD	SCREENING_POP	f	SNP													G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32983503					SNP	G	G	G	G	G	C	G	C	G	G	C	C	G	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60592245	NES16320136	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34574862 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20241	CpG island 20241	407 bp proximal
Dctn6	dynactin 6	within coordinates
Rr400814	regulatory region 400814	638 bp upstream
Tssr80889	transcription start site region 80889	54 bp downstream
Tssr80890	transcription start site region 80890	108 bp downstream
Tssr80891	transcription start site region 80891	735 bp downstream
Tssr80892	transcription start site region 80892	803 bp downstream
Tssr80893	transcription start site region 80893	1084 bp downstream