rs32985765 SNP Detail

Summary

• ID
  rs32985765
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:11321936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATCCCAGCCT CAGTTTCCCG CGAGGGGTGC GATCCCTCCC ATTCTGCACC CAAAGCTTCC
  AGCCTGGACC AGAACCCACC CAAGCTCGTC CTGCTTTCCA CTGCGGAGCA ACTCCGGACC
  CGCAGCCCCG CCACCCAACA ACAGCTTCCT TTCCGAGACT CCTGACTTTA AGTTCCACTT
  CTGCGTCCTA TTTCGGGAGA CGAAACTTTG GGCCATTTTC TCGGCTCGCG CCCGGTTCCA
  CTGCAAACTC GGGGGCGCGC GCCCCCGCCC GCCCTGCTCC CCGCGGCCCG CAGCCAGCAG
  Y
  CAGGCCCGGC CCCTCTCCCG AGCCCGCCGC GGCAGTTGGC GCGCTACACG CCGGAGCCTT
  CACCTTCTTC CTTTGCCATC GTCTCCGCGG AGACCCGAGT GGCCCTACGG CTCCCGAGCA
  GCCCGGAGTC TCCCAAACCT CCGAGTATCC AAACCCCGCG GCCGCCCCGG CCAGCTCCCG
  GCTGCCGCGC CCCCACTTCC TGACCCGCCC CCCTCTGGTG TCTCCGCCAA CTGGGTCCCT
  CCAAGGCGCT CCGGGAACCA GAGTGCAGGG AGCGGGGCCC GGCCGGAGCG TTTCGCCAGA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45723586	mCV23467955	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss146013125	ENSMUSSNP1293488	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32985765					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:11321936 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14033	CpG island 14033	within coordinates
Dpy19l4	dpy-19 like 4	within coordinates
Gm26663	predicted gene, 26663	29 bp upstream
Rr588912	regulatory region 588912	within coordinates
Rr588913	regulatory region 588913	191 bp proximal
Rr588914	regulatory region 588914	202 bp proximal
Rr588915	regulatory region 588915	321 bp proximal
Tssr36477	transcription start site region 36477	23 bp downstream
Tssr36478	transcription start site region 36478	within coordinates
Tssr36479	transcription start site region 36479	294 bp upstream
Tssr40926	transcription start site region 40926	140 bp downstream
Tssr40927	transcription start site region 40927	173 bp downstream