rs32986733 SNP Detail

Summary

• ID
  rs32986733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102619433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT TGTGCCATCC GGAACATCAG
  Y
  TTGAAGGCCT AAGATAAGCT TATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45722999	mCV23032619	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss147134495	ENSMUSSNP5501403	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32986733					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102619433 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14510	CpG island 14510	1750 bp distal
Rr596308	regulatory region 596308	1701 bp distal
Rr596309	regulatory region 596309	1213 bp distal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1	within coordinates
Tssr38070	transcription start site region 38070	1958 bp downstream
Tssr38071	transcription start site region 38071	1861 bp downstream