rs32987314 SNP Detail

Summary

• ID
  rs32987314
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:167893270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGTCAGG CTTGACAGCA
  AGCAATCCTG TTTTTTGAAA GTTTGGGGTT TTTTTGTTTT TGTTTTTGTT TTCCTGAGGC
  TAGGTCTCAA ATAGCCCAGG CTGGCCTCGA ATTCACTATA TAGCTGGGGT TGATAGACTA
  AAGCCAACCA CCATGCCCAG CTTTGCAGGA ACTTTGAACA GCAGGAATAC ATGCATGCAT
  R
  CATACATACA CACATATACA TACATGCACA CCTTGTAAGA ATGGGCTTGT ACAGGAAGTG
  GAGAGTCGCT TAACTGTCCC CTACATAACA GCCAGGTGAA TAAAATGAAA GTGAGCTGTG
  ACCTGCTGCT GTAATCCCAG CACTCGGGAG GCTGAAGCAA GGGGGTAGTA AATTGGAGGC
  TAGCCTGAAC TACATAGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45221776	mCV22943472	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss148265655	ENSMUSSNP4186225	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32987314					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:167893270 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12760	CpG island 12760	440 bp distal
Gm57439	predicted gene, 57439	923 bp upstream
Rr406967	regulatory region 406967	480 bp distal
Rr570860	regulatory region 570860	994 bp distal
Rr570861	regulatory region 570861	1137 bp distal
Rr570862	regulatory region 570862	435 bp distal
Rr570863	regulatory region 570863	1427 bp proximal
Rr570864	regulatory region 570864	1524 bp proximal
Tssr27820	transcription start site region 27820	1269 bp upstream
Tssr27821	transcription start site region 27821	986 bp upstream
Tssr27822	transcription start site region 27822	950 bp upstream
Tssr27823	transcription start site region 27823	922 bp upstream
Tssr27824	transcription start site region 27824	596 bp downstream