rs32988050 SNP Detail

Summary

• ID
  rs32988050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92419612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCTTCAA CGCCTCAATG
  GGAAAAAAGA CTTTATGTTA GTGACACGTT TTGGACTATT CATAAAGAGA TTAAAATGTG
  AGCACACACA CACACACACA CACACACACA CACACACACA CACACACTGC ATCTACATGC
  AGGTTGCAAA GGCAAAGGCC CTGGTGCAGA GTAGAATACA AACACTCTAA TAAATCCCTA
  R
  GGAGAATTCA ATTGACAGCT GTCTACTAGA CCTAGAAACC ATGACTCTCT CAGCCTACTT
  CACAAGGAAA ACTATAACCT ATGCACTTTT TTTATCATTT ATATATTATT TCCTCAAAGT
  CAATATGAGA AAGAAAAGGA CTTCCTGGCT TATTCCATAG ATGTCACACC TGCATTAGAA
  GCACTAAGCA TTTCAGTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46756776	NES10742067	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32988050					SNP	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46756776	NES10742067	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92419612 () rs orientation: forward

Symbol	Name	Function Class
Rr69137	regulatory region 69137	1012 bp distal
Rr69138	regulatory region 69138	within coordinates
Rr76692	regulatory region 76692	1129 bp distal
Rr76693	regulatory region 76693	155 bp proximal
Rr76694	regulatory region 76694	1164 bp proximal