rs32989664 SNP Detail

Summary

• ID
  rs32989664
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92420420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATATATGT TGTGAAAGAT
  ATACATATAT ACATTGTTGA ATGCCTACAC CAAGCTACAC ATTACCACAA TGCTTAATGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTTTGT GTGTGATGAG ACTATGTAAC GTCTACTCAC
  TGATTTCCAA GTATATGATA CACTATTACT GCAGTCTTCT GAACCATCTC CCATGAAGCA
  M
  TGCAGCCTTT GATCAATGCT TCTGCCTCTG TGATTTGGAT TGCATATATG AATGAAGCCT
  TGATGTATTT GTCTTACCAT GGCAGCACCA ACTCATTGGA ATCTCAGCTC TTGAGCTAAA
  ATTGGATGGT GTTGGCCAAG TTTTGGTTAC CTCCTTAAAT TTTGTTTTCA CCATTTTCAA
  AACTAAAATC TTTATGTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46756791	NES10742033	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32989664					SNP	C	C	C	C	C	C	A	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46756791	NES10742033	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92420420 () rs orientation: forward

Symbol	Name	Function Class
Rr69137	regulatory region 69137	1820 bp distal
Rr69138	regulatory region 69138	420 bp distal
Rr76692	regulatory region 76692	1937 bp distal
Rr76693	regulatory region 76693	518 bp distal
Rr76694	regulatory region 76694	356 bp proximal