rs32991238 SNP Detail

Summary

• ID
  rs32991238
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:101611276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCATAGAGT GTCCTTGCCT
  GACACTGCAT GGATAGCCAG AATCTGACGA CTAGATAGCT CAGAGACCTA GGTTAGACCA
  AACAGGAATG GTCTTTAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAGTA CTTTTAAACC
  ACAAAATATC TACAAATTAC ATCAGTGGAT AAAAAAAGCT GCAGAAAGGC ACTGCTAATA
  Y
  TCAATCAAGT ATTTATAGAA CAACTGAAAT GTTCAGAGGA AAAATCTTGG CTTTCTGAGG
  TATAAATAAC CCATCAGGAA TTTTAGTAGA TGGTGTAAGT TCTCCTTTAA ATAAGGTAGA
  AAACAACACA GCACAGTAAA ACATAAATGT TTTGTTCCAG AGGTATGAGA GAATATTTCC
  ATATATAAGT TATAAAAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47242355	NES11396961	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32991238					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47242355	NES11396961	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:101611276 () rs orientation: forward

Symbol	Name	Function Class
Gm16285	predicted gene 16285	1169 bp upstream
Tc2n	tandem C2 domains, nuclear	426 bp downstream
Tssr117358	transcription start site region 117358	1257 bp downstream