rs32991538 SNP Detail

Summary

• ID
  rs32991538
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189086281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACAGAAGT CCTCTTTTTC
  TTCATATTAA AGTCATCCTC TGGACACAGG TAAAAATATT TTCCACAAGC TGGGTTCTGG
  TTAAAATAAA ATTTAACTAT AGTTTGCTGG TTGCTAAGAG AACCAGTGTA TGTGATAAAA
  TATAAACACG GTAAGGACCC TGGAGAGGGT CTGGGCTCAT AGCCAGCAGG TGTGCAATGC
  M
  CCTAGCACTG TGACTCATAT GGTGAACAGG TTTACCAGGA ATCTCACTCC TGTCCTTACC
  ACCACAGTGC CACACTAGGC TCATTTTAAT TAATACTAAG TTGTCAAATA TTTACTGAAC
  TATTTTTAAC CACTGGTGGA AATCTGTTAG CCACTAAGGG TAGCTATGAA TACTGTTTCA
  TGACCTTTTT CATTTTCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46756893	NES10642209	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32991538					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46756893	NES10642209	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189086281 () rs orientation: forward

Symbol	Name	Function Class
Kcnk2	potassium channel, subfamily K, member 2	Intron
Rr425789	regulatory region 425789	within coordinates