rs32992386 SNP Detail

Summary

• ID
  rs32992386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189086823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAAAGCT GCATTGCTCA
  GATTCCAAAC CGACTCCCAG TGTTCTTGGT AATGAGCTGC CTTGTGTTTG TTTTGTTTTG
  TTTACTGGAG TCGTGATTGT CACTTTGGGA TATGGCATTA TATTCTCCAC ATGTACTAAC
  TGCATGACAG ACAGTTGGCC TTAACTGCAG CTATCTTTCC TGGAGCCCCT GAACTTGAGT
  R
  TTATATTTGG AGTTAAAAAA CAAAAAACAA AAAACAAAAA ACTATCTTTG CTGGTATTCT
  TTTGCCGTGA AAAGATACCA TGATCACACC AACTTTTACA AAAGAAAGAA TTTCCTTGGG
  ACTGGCTTTC AGTTTGGGAG GTTTGGTCCA TTTTTATCAC AGTGGGAACA TGGCAGCATG
  CAAGCAGACG TGATGGAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46756902	NES10642212	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32992386					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46756902	NES10642212	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189086823 () rs orientation: forward

Symbol	Name	Function Class
Kcnk2	potassium channel, subfamily K, member 2	Intron
Rr425789	regulatory region 425789	331 bp distal