rs32993366 SNP Detail

Summary

• ID
  rs32993366
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:101611981 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACAGGTT ATGCAGCAAG
  AGAAAGAAAA TAGAAGAACA TCTTCCTAGT CATCACAGAC ATGGACATTT TATTGATTTG
  ATACGCCCTG AAGAAACACT AAATAAATTT CCAAACACTG AAAAGACAGG CACTTTAAAT
  ATCCATTAAT ATCCTTATTA AGAATGGTCT AAACTTATTC CAAGTTTTTG AAATCTTTTA
  Y
  ACATGTACAA ATATATGAAC ATATAAGCAA TGAGAATTTT TTCTGGAAAG CAATTTCCAA
  CTGGCTGATG AGTTTATTAG TATCAGAGAA AGTTGAAAAA CTATATTCAA ACAAATTCAG
  GTTAGTTTGT TTTTAAACCA TAATTATGTG TGTTCAAAAA TCACAATGAT TTCTTCTCCA
  CAGTCAGGTA AGAATTTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47242385	NES11396973	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32993366					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47242385	NES11396973	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:101611981 () rs orientation: forward

Symbol	Name	Function Class
Gm16285	predicted gene 16285	464 bp upstream
Tc2n	tandem C2 domains, nuclear	mRNA-UTR
Tssr117358	transcription start site region 117358	552 bp downstream