rs32995068 SNP Detail

Summary

• ID
  rs32995068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:158224786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCGATT AAAAAAAACA
  ACAAAAGACA GACTTCAAGC CGTTTTGGCA CCCAGAGACC AAACCCCACC CAGAGTCTTT
  GTTTTTATGA TTACTAAAAC TTCATGTCTT AAATTTATAT CTTTGTAAAA CAGAAAAAAA
  TTTAAATAGC AATGTGATCA AACTTGGATT TTAAAAAAAA TAGGGGCAAA TTGGAACCAA
  R
  AAGGAATATT TCTTATGGAT AATACGGTGG CCAAGGACTG AAAAACAGAA GTGTAGTCGA
  TAGGAGTTAG ATTACTTGAA AGTTTCCACC TAAGATTTTT TTGGTACAGC CTGAGAATAG
  GTGGGATGTA GTAAGGAATA GAACGGTCCA GAAAGTTCTT CTTCCATGGA AATGTTATTC
  TTCGATACTG TTCACATGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45222961	mCV22929136	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32995068					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:158224786 () rs orientation: forward

Symbol	Name	Function Class
Snhg11	small nucleolar RNA host gene 11	within coordinates
Tssr21317	transcription start site region 21317	1468 bp downstream
Tssr21318	transcription start site region 21318	692 bp downstream
Tssr21319	transcription start site region 21319	278 bp downstream
Tssr21320	transcription start site region 21320	242 bp downstream
Tssr21321	transcription start site region 21321	132 bp downstream
Tssr21322	transcription start site region 21322	9 bp downstream
Tssr21323	transcription start site region 21323	26 bp upstream
Tssr21324	transcription start site region 21324	58 bp upstream
Tssr21325	transcription start site region 21325	98 bp upstream
Tssr21326	transcription start site region 21326	120 bp upstream
Tssr21327	transcription start site region 21327	169 bp upstream
Tssr21328	transcription start site region 21328	207 bp upstream
Tssr21329	transcription start site region 21329	220 bp upstream
Tssr21330	transcription start site region 21330	242 bp upstream
Tssr21331	transcription start site region 21331	815 bp upstream
Tssr21332	transcription start site region 21332	952 bp upstream
Tssr21333	transcription start site region 21333	984 bp upstream
Tssr21334	transcription start site region 21334	1751 bp upstream
Tssr27228	transcription start site region 27228	335 bp downstream