rs32999514 SNP Detail

Summary

• ID
  rs32999514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:89732664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGAAC GGATGGGGTA ACCTAGCCCA
  R
  GGCAAATCTA CCCAGCTTGC TTGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46220951	mCV24089588	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss145494963	ENSMUSSNP5731094	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
ss322769751	CHEV_8_91529935	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32999514					SNP	A	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:89732664 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20796	CpG island 20796	398 bp proximal
Gm56831	predicted gene, 56831	within coordinates
Rr1386	regulatory region 1386	1339 bp distal
Rr366841	regulatory region 366841	within coordinates
Rr406251	regulatory region 406251	within coordinates
Tssr82368	transcription start site region 82368	576 bp downstream
Tssr82369	transcription start site region 82369	604 bp downstream
Tssr82370	transcription start site region 82370	623 bp downstream
Tssr82371	transcription start site region 82371	635 bp downstream
Tssr82372	transcription start site region 82372	661 bp downstream
Tssr82373	transcription start site region 82373	1243 bp downstream