rs33000454 SNP Detail

Summary

• ID
  rs33000454
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34726507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGATTTTA TTTATTTTAT GTACATGAGC ATGTTGTCGC
  TGTCTTAATG CTCACCAGAA CACAGCATCA GATCCCATTA TAGGCCGTTG TGAGCCACCC
  Y
  GCGGTTGCTG GGAATTGAAC TCAGGATCTT TGGAAGAGCA CCCAGTGCTC TTAACTGCTG
  AGCCAACTCT CTAGCTCCAA ATCAGATATC TTAATGGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46221469	mCV22854742	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss322576438	CHEV_8_35322407	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33000454					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34726507 () rs orientation: forward

Symbol	Name	Function Class
Gm63978	predicted gene, 63978	within coordinates
Gm63981	predicted gene, 63981	385 bp downstream
Tssr80908	transcription start site region 80908	1175 bp downstream