rs33002879 SNP Detail

Summary

• ID
  rs33002879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:17382921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGT ATGACACACA GCAATATAGG
  R
  AAACATTTCC ATGCAACACA CTAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46222000	mCV22518722	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148765717	ENSMUSSNP5088134	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322521493	CHEV_8_17332905	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33002879					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:17382921 () rs orientation: forward

Symbol	Name	Function Class
Csmd1	CUB and Sushi multiple domains 1	within coordinates
Tssr80508	transcription start site region 80508	404 bp downstream