rs33004234 SNP Detail

Summary

• ID
  rs33004234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127546335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCTTCTTC CCTCCCTCCT
  TCCATTGTCT TGGTATCTCT TCACAGCAAT AGAATACTAT GACTTGGACT TAAACTATCC
  CAGGAGTAGT TTTGACAACA TTTCATAATA GAATCAACAA AAAGATGGCC AGATGCATGG
  GCCAACAATA ACAAAGCGAT AGACTCCACA CTTCCCACTG TCCAACAATC TTTTATTTGC
  Y
  CGAGGTCATT CAGCAAATAC TCAATGGTGA AGATCACAGA CAGTTCCCAG GCTAAAGAAA
  AAGAAAAGAG AGAGAGAAAT GGTGGCTTTT CAAGACATTG GGGCAATTAG TAACCGGTAA
  ACAGTGGCGA AGCTAAGCCT GCACACACAC ACCCATGTCC CAGCCCCACT CCAACATACT
  TCAGGCCCCC ATCCCCACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45224509	mCV22278175	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33004234					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127546335 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	1806 bp distal
Gm10765	predicted gene 10765	704 bp downstream
Mall	mal, T cell differentiation protein-like	within coordinates
Tssr20034	transcription start site region 20034	1994 bp downstream
Tssr26137	transcription start site region 26137	1070 bp downstream
Tssr26138	transcription start site region 26138	1252 bp downstream
Tssr26139	transcription start site region 26139	1331 bp downstream
Tssr26140	transcription start site region 26140	1354 bp downstream