rs33004863 SNP Detail

Summary

• ID
  rs33004863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137590111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGG CTTTGGGATT CGAGAACATC
  R
  TGGGAGACTA GGGCACTTTT CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45724748	mCV24782995	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147622955	ENSMUSSNP1425954	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33004863					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137590111 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15140	CpG island 15140	within coordinates
Ece1	endothelin converting enzyme 1	within coordinates
Rr602748	regulatory region 602748	553 bp distal
Rr602749	regulatory region 602749	within coordinates
Rr602750	regulatory region 602750	1920 bp proximal
Tssr39783	transcription start site region 39783	551 bp downstream
Tssr39784	transcription start site region 39784	532 bp downstream
Tssr39785	transcription start site region 39785	479 bp downstream
Tssr44151	transcription start site region 44151	691 bp upstream