rs33007635 SNP Detail

Summary

• ID
  rs33007635
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27748874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCAATCATCT TTAACTCCTC AACTTATCCA AGTGCCTTAG GGGTAATAGA ACACTGTCTT
  AGTCAGTGTT CTATTGCTGT GACGAGATAC CATGACCACT GCAACTCTTA TAAAAGAGCA
  CATTCAATTG AGGTTTCTTG CTGTTTCAGA GGTTTAGTCC ATTGTCATCA TGGCAGGGAG
  CATGGTGGCA CACAGGCAGA CATGGTGCTG GAGATGTAGA TGAGAGTTTC TTATTTGGGT
  CTGTAGGCAG CTGTAAGAGA GAGCCACTGG GCTTGGCTTG GCCAATTTTT TTTTGTTTTT
  K
  TTTTGTTTTT GTTTTTGTTT TTTTGTTTTT GTTTTTTTGA GACAGGGTTT CTCTGTGTAG
  CTCTGGCAGT CCTGGAACTC ACTTTGTAGA CCAGGCTGGC CTCGAACTCA GAAATCTGCC
  TGCCTCTGCC TCCCGAGTGC TGATCCCCCA ACCTTCCCTT CCCGAGTTCT AGGATTATAA
  GCTTACAAAG TGCCACCACG TTCAGTTTTT ATGTTGATGC TTCGGATTTA ACCGTGGACT
  TAGTGTATAC GTGGTAAACT GTCTACCAAG TGAGCTGTGT TCCAAGCTTC CCCTTCCCCG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46222321	mCV24519104	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	G
ss148886525	ENSMUSSNP6987007	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33007635					SNP	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27748874 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	1092 bp proximal
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	1481 bp upstream
Rr176179	regulatory region 176179	1874 bp distal
Rr186444	regulatory region 186444	526 bp proximal
Tssr76776	transcription start site region 76776	1475 bp upstream
Tssr76777	transcription start site region 76777	1486 bp upstream
Tssr76778	transcription start site region 76778	1549 bp upstream
Tssr76779	transcription start site region 76779	1583 bp upstream
Tssr76780	transcription start site region 76780	1651 bp upstream