rs33008106 SNP Detail

Summary

• ID
  rs33008106
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103638257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTAAAAAGG GGGAGGACCA AAGAATGCAA TAGAGGTCCC AACATGACCG CTGGCCCCTA
  AACTCATGCA TACTTTTACA CACACACACA CACACACACA CACACACACA CACACACACA
  CACACCGAGA CAGGGAGCGT TTCAATGAGT TATTTAGAGT TATAACATAG ATCAGAGTAA
  CTGAGACTGT GTCTCATGTT GGACGTACAT TTGCAGTTAT ATAACTATAT AATTATATAT
  GTGTGTGTGT TTGAAAGTTT GGCTTATATG GAGTAGCATT ATTAGGAGTC TTTGTTGGAG
  R
  AAGTATGTCA CTGGGGGTGG GCTTTGAGGT CTGCTTAAGC CAGGTCCAGA GTGTGTCTCT
  GTCTCCTCCT GCTGACTGTG GATACAAATA CAAAACTCTC AGCTCCTCTT CAGCATTCTG
  TCTGTCTGCA CGACACCTTG CTTCCCACCA TGTCGATAAT GGACTAAACC TCTGAACTGA
  AAACCAGCCC CAATTAAATG TTTTCCTTCA TAAGAGTTGC CATGGTCATG GTGTCTCTTC
  ATAGCAATGG AATATACATA TATTAGTATG TCTATATTTG TATGTATGTA ATAAAACATT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45225389	mCV25169072	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147139037	ENSMUSSNP6312002	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33008106					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103638257 () rs orientation: forward

Symbol	Name	Function Class
4930547E08Rik	RIKEN cDNA 4930547E08 gene	within coordinates
Gm75184	predicted gene, 75184	within coordinates
Rr561936	regulatory region 561936	127 bp proximal
Rr561937	regulatory region 561937	701 bp proximal