rs33009948 SNP Detail

Summary

• ID
  rs33009948
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82284140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACC CTTCATGATT GATTACCAGC
  Y
  ACATTCCATG AAATAGCCTG TGTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J	WSB/EiJ
ss47744280	NES11286434	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C		T	C		C
ss323041519	CHEV_9_82295694	CHEVERUD	SCREENING_POP	f	SNP											T			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J	WSB/EiJ
rs33009948					SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47744280	NES11286434	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82284140 () rs orientation: forward

Symbol	Name	Function Class
Rr197700	regulatory region 197700	461 bp proximal
Rr197701	regulatory region 197701	1861 bp proximal
Rr205139	regulatory region 205139	1931 bp proximal