rs33011068 SNP Detail

Summary

• ID
  rs33011068
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153067875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTGCTCCA TTGTATTGAC CTGTGAACAT TTATGGAGTG
  CTTTCATGGT TGCTAATTGA TATAGGATGG CACAGCCCCA CTGTGGGTAG TGCCATCCCT
  K
  GTCCGATGGC CTGGGCTGTG TAGGAAAGGT AGCTGAAGGC TGTGAGGAGC AGAGGAAGCC
  CTGATGAAAT GTTTATTACT GATAAGGATC AATGCCTCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45225343	mCV23160146	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss147988225	ENSMUSSNP1078877	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33011068					SNP	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153067875 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12481	CpG island 12481	515 bp distal
Plagl2	pleiomorphic adenoma gene-like 2	1814 bp downstream
Tspyl3	TSPY-like 3	514 bp upstream
Tssr26887	transcription start site region 26887	903 bp upstream
Tssr26888	transcription start site region 26888	561 bp upstream
Tssr26889	transcription start site region 26889	513 bp upstream