rs33013118 SNP Detail

Summary

• ID
  rs33013118
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91258600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA TTCTCGAAGC CATCCAGCAA
  Y
  CTGTCTCCAT CTGCATACCC AGAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45725671	mCV23976700	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss146983064	ENSMUSSNP7023957	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33013118					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91258600 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14444	CpG island 14444	544 bp proximal
Elavl2	ELAV like RNA binding protein 1	within coordinates
Rr595258	regulatory region 595258	532 bp proximal
Rr595259	regulatory region 595259	1282 bp proximal
Rr595260	regulatory region 595260	1661 bp proximal
Tssr42416	transcription start site region 42416	1583 bp downstream
Tssr42417	transcription start site region 42417	1621 bp downstream
Tssr42418	transcription start site region 42418	1665 bp downstream