rs33014291 SNP Detail

Summary

• ID
  rs33014291
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:85964336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTTGAAA TATGACTTGG
  ATGGATACTG TAGTATGCTG CCCATGGATG AGCTGGCTCT CCAGGATGCT GGTATAGTCA
  CTGCTAGCCA CTTAACATCT ATACCTCTGT CTGTGCATTG TCTTAACTAA AGAAAGCTGC
  CTCACCCAAG ATCATACCAC TTCCCAAAAG GCAAGGTAGG TTGAAGAACA AGAAGCACAT
  K
  TACGGCTAAA AACAAAACAA AACAAAACAA AGCGAAGCGA AGCGAAACGA AACGAAACGA
  AACGAAACAA AACAAAACAA AACAAAACCC TGGATCCTCA GTTGAGAATA ATCCTGGAAG
  ACCATCCCAA ATGAATGAAA AAAGATGAGG ACATGACAGC CCCTAAGTAT AGTTGAGGAA
  GAGTATATTT GTAGATATGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49432433	NES12815746	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		G	G	T	G
ss144872111	ENSMUSSNP1516499	ENSEMBL	ENSEMBL_Sanger	f	SNP		G					G				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33014291					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49432433	NES12815746	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:85964336 () rs orientation: forward

Symbol	Name	Function Class
Rr414457	regulatory region 414457	1600 bp proximal