rs33015981 SNP Detail

Summary

• ID
  rs33015981
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140688475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGCC CCTCCACGCT ACCCTTCCCT
  M
  TCCCGCCCCT CAGACTCCAG AGGTC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45726272	mCV23009629	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss147720360	ENSMUSSNP3904309	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33015981					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140688475 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15201	CpG island 15201	within coordinates
Gm34431	predicted gene, 34431	within coordinates
Gm68270	predicted gene, 68270	within coordinates
Rr367768	regulatory region 367768	within coordinates
Rr603592	regulatory region 603592	within coordinates
Rr603593	regulatory region 603593	10 bp proximal
Rr603594	regulatory region 603594	66 bp proximal
Rr603595	regulatory region 603595	123 bp proximal
Rr603596	regulatory region 603596	1567 bp proximal
Sdhb	succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	107 bp upstream
Tssr40003	transcription start site region 40003	118 bp upstream
Tssr40004	transcription start site region 40004	137 bp upstream
Tssr40005	transcription start site region 40005	208 bp upstream
Tssr40006	transcription start site region 40006	240 bp upstream