rs33016977 SNP Detail

Summary

• ID
  rs33016977
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129713747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC TCCTCCCACT TTTCCCATCC
  Y
  CCTTACCTGT ATCGCGCTCT TCCCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45225780	mCV25265640	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss320505880	CHEV_2_129697563	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs33016977					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129713747 () rs orientation: forward

Symbol	Name	Function Class
Gm75517	predicted gene, 75517	within coordinates
Rr564987	regulatory region 564987	241 bp distal
Rr564988	regulatory region 564988	1697 bp proximal
Rr564989	regulatory region 564989	1884 bp proximal