rs33018067 SNP Detail

Summary

• ID
  rs33018067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:47009940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGCTTGCT GCCTACTGGG
  AAGTAGTTCC AACAGCGCCA AGCAGGTGCA GGGAGCTGGA AAGGCCTGCC CTTCCAGAGC
  CTGGGAAGTG AGTGCCCCAG GAGACTTTCC ATGTCAAGTG AGGGAGGGTG TCACTGCAGA
  ACGAGCCTTC GTAAGCCCAG GAATGAAGCT GCCCATGGCC TCGTGGATGA GGTGCTCAGT
  Y
  AGGCACAGTC TGGGTGTCGG AGAATGTAGT AGGGTGACTT AGAGCAAACA TAGCCAAGTG
  CTTGGCCACC GACACTCCTT GTGACAGGTA AAGGCTCTAG AGTTGTGTGG ACATGATGGT
  CTGAGGTGGC CCCTTAGCTT GAAGGACATG GAGACCATTT TCCTCCCCAA GTCTCACTCC
  CAGGAAATTT CTAGAGCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45726609	mCV25226526	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146270517	ENSMUSSNP878880	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33018067					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:47009940 () rs orientation: forward

Symbol	Name	Function Class
Gm568	predicted gene 568	within coordinates
Gm68750	predicted gene, 68750	920 bp upstream
Rr367622	regulatory region 367622	688 bp upstream
Rr591772	regulatory region 591772	566 bp proximal
Rr591773	regulatory region 591773	931 bp proximal
Rr591774	regulatory region 591774	1187 bp proximal
Tssr37147	transcription start site region 37147	1298 bp upstream
Tssr41615	transcription start site region 41615	857 bp downstream
Tssr41616	transcription start site region 41616	1186 bp downstream