rs33018658 SNP Detail

Summary

• ID
  rs33018658
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:30239524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGTGGCT TAACTAGATG
  CAAACATACA AAAGAAGTTA AGAAGTGGGG CGATGCTGGT TTCCTGACAC TTCTGAGACA
  TCCTTCTTCC CTTTGCTATG CAGGTCATTA GGCTCTGTGC CAACTCTTCT TCTGTGCCCC
  TCACCACCTT CCCCATGTCC CTCCACCTGG AGCTGTGGGC CTCTGAACAT GACCTGTTTT
  K
  GGAAATGGAC ATTTTTACAA TTGGAAGAAT TTCTTCCTGT TGCCCTGAAG AGGTGTGTAT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTTT GTTGGTTAGG GTAACCTTGC
  ATACACACCC ATACATACAC ATCATGTAAG TTGTCAGTTG CCTGTGTTTT CTTTCATCCA
  TGTCTACAGC CCTCATGGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss49433114	NES12619251	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	T	G	G	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs33018658					SNP	T	G	G	G	T	G	G	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49433114	NES12619251	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:30239524 () rs orientation: forward

Symbol	Name	Function Class
Ctnnd2	catenin delta 2	Intron
D15Mit249	DNA Segment, Chr 15, Massachusetts Institute of Technology-249	within coordinates