rs33025416 SNP Detail

Summary

• ID
  rs33025416
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152386537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGCGAT GAATGTAATC
  TGCCTTAAGT GCTTGTATGT GCCTAAGTGC TTTAGAGAGG AAAGATTTTT CATACCTTTT
  TAGATAATGG GTATTTTCTA CATTGTGCCC TGGTACTTGT GCTTGCCTGC GTGTGTGAGG
  GGCTAGGTGC TTGCACGCAT GTGTGGAAGA TAAGTCTTAC CTGCAACAGT ATTTACCCTT
  W
  AACAAAACAC GGATTTATCC TCTTAACTGG AATGGTGCTG GTGAGACACT GGCTGATCTC
  CAGCTCAGTA AAAGGTTGTC CGTGATGATT AAGAAACTTA CCACCAAGGC TGCCCTGGTG
  TGAGGGCACA GACTTTGTGC TGACAGATGG GCGGGGCCTG GCCACTGAGG CGTCCCTTGT
  CTACCCTATA AGCCAGGGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45727993	mCV23461467	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss148080464	ENSMUSSNP7000340	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
ss321434090	CHEV_4_151676189	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33025416					SNP	A	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152386537 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	1207 bp downstream
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rr605836	regulatory region 605836	1151 bp proximal