rs33026307 SNP Detail

Summary

• ID
  rs33026307
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189666691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTTTAAT TTGATGAAGA
  CATTGGCTCA GATACTTAAA ATATGCCAGT AACTTAGGAG GAGAATAGAG AAGGGCTTGT
  TCAGTATGGT TTCCTGTTAT TAACCTTGTA CCAAGGAAAT GGAGGGAGAA GGGTAAGGAA
  ATCTCAGAGG GCCTCGTATG GAGGAAATCA GGAGGAAAGA GAAAGGACTC TCCCAGGTTG
  Y
  TATGAACGTT TTGTTTGCAT AAGCGCCAGA AAGATGACTG TGTGATTAAG AGTTCTTACT
  CCTCCTACAG AGGTCTACCA CAGCCCGAGA GCTGGGTCTC AGACACCTGC CTGGGGGTGA
  TGGGAAATTA AGACAGGTAG GTAAAAGCCG CACAAAGCTG GAATCGGACG GGCCGTGTGC
  ACTTGGAGGA AGACACATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46762425	NES10655422	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33026307					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46762425	NES10655422	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189666691 () rs orientation: forward

Symbol	Name	Function Class
Gm70902	predicted gene, 70902	1822 bp downstream
Rr425891	regulatory region 425891	637 bp distal
Rr425892	regulatory region 425892	1401 bp proximal