rs33026309 SNP Detail

Summary

• ID
  rs33026309
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189666835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGGCCT CGTATGGAGG
  AAATCAGGAG GAAAGAGAAA GGACTCTCCC AGGTTGCTAT GAACGTTTTG TTTGCATAAG
  CGCCAGAAAG ATGACTGTGT GATTAAGAGT TCTTACTCCT CCTACAGAGG TCTACCACAG
  CCCGAGAGCT GGGTCTCAGA CACCTGCCTG GGGGTGATGG GAAATTAAGA CAGGTAGGTA
  M
  AAGCCGCACA AAGCTGGAAT CGGACGGGCC GTGTGCACTT GGAGGAAGAC ACATGCACAG
  CTCAGATTCT CAGAGTGTGT ATTATATACA GCACGGATAA GAAAGCAGGT TAGCTTATCT
  TGGTCGGGGA TCTTACAGGG GATCGGTCTA GGGGGGATTG TGATCCTGCA GTCATCTGGG
  GTACTCTGCA TGTTCTGTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46762428	NES10655424	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33026309					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46762428	NES10655424	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189666835 () rs orientation: forward

Symbol	Name	Function Class
Gm70902	predicted gene, 70902	1966 bp downstream
Rr425891	regulatory region 425891	781 bp distal
Rr425892	regulatory region 425892	1257 bp proximal