rs33026446 SNP Detail

Summary

• ID
  rs33026446
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121485413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA AGAGGAGGAA GGGGAAAAGG
  W
  GGAAGAAAAA GAGGATGCGA AAGAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45227635	mCV23864548	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	T
ss147394626	ENSMUSSNP3175869	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss320484426	CHEV_2_121480668	CHEVERUD	SCREENING_POP	f	SNP						A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33026446					SNP	T	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121485413 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frmd5	FERM domain containing 5			Intron
				Noncoding-Transcript-Variant
Rr563864	regulatory region 563864			282 bp proximal
Rr563865	regulatory region 563865			1055 bp proximal