rs33029012 SNP Detail

Summary

• ID
  rs33029012
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189724275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATTCAGGT GACAACCCCA ATATCCTTGC TGGTTCTCCC
  GGTCTCATCG CAAATTCACA GTCTGCAGAG ACATCATTTA ATAGTGTTTG AAGAGATTAG
  Y
  CAGGCCACGG ACAGAACAAT TTTCAAAACA TCAATCTGGT TCATTCCAGG CTTAATTCTT
  TCAATAGTTT CCCTGAAGAC AAAATTGGAA ACGGTGCTGG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
ss46763133	NES10652219	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
rs33029012					SNP	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46763133	NES10652219	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189724275 () rs orientation: forward

Symbol	Name	Function Class
Gm69432	predicted gene, 69432	1790 bp upstream
Gm70453	predicted gene, 70453	1402 bp upstream
Rr425897	regulatory region 425897	1801 bp distal
Rr425898	regulatory region 425898	1643 bp distal