rs33029077 SNP Detail

Summary

• ID
  rs33029077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3767005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTATAATG CTTTGTTGTA
  CAAAGACCTG AGTTCAAATC CCAAGTAGTC ACATAAAAAG CTCTGTATGG TTGTGCAAGT
  GTTTATAACC CAAGCAGGGT AAGGTTTGGA GACAGGAGAG CCTCTGAGGT TTTCTGACTG
  TTAGTCAACC TAGATCCAGG TTCACCGAAA GAGCCTGTCT TAATGGAGTA AGGTAAGGAA
  Y
  GATAGACTAG ACTACCCAGA GTTTCCCCCT AGTCTTTGCA TGGGCATGAA TGGACCTGTG
  CAGTGACATA TGCACCAAAA CATCAACACC AATCTTCTCT CAGGAATTTA GTCTTTAGAT
  ATCCAAAAGC ATTTTCCACA GGGTCTAACT CAACCCTCTT CAAATTTTTC ATGGGGCCTT
  CTCCTTACCT GAAGTTGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46225326	mCV22849320	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148548722	ENSMUSSNP1939847	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33029077					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3767005 () rs orientation: forward

Symbol	Name	Function Class
Clec4g	C-type lectin domain family 4, member g	within coordinates
Cpgi20034	CpG island 20034	1620 bp proximal
Gm16553	predicted gene 16553	within coordinates
Rr400747	regulatory region 400747	1564 bp upstream
Rr658970	regulatory region 658970	1594 bp proximal
Rr658971	regulatory region 658971	1715 bp proximal
Tssr80223	transcription start site region 80223	542 bp downstream
Tssr80224	transcription start site region 80224	557 bp downstream