rs33031278 SNP Detail

Summary

• ID
  rs33031278
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189726377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCTTCC CAAGCAGGGG
  AAACAATAAC ACCGTTTAAC AGCTACTTGC GACATCTAGA TCCCCTAGGG ACCAGTTAAC
  ATTACATCTT TGTGATTTGC TCTTTGGTTC CTTCTTTAGA CTGCCTGACC AAAACAATAA
  AAATTGAAAC AAGTCAGACA CTCCTGGCTG GAAAATTCTA AATATAGCAG AAACACCTGC
  R
  CTCAAGCCTG CTTTCCTTCT AGGGGTGAGT GGGTGAGAGG CTCCCTTGCA GATAGAAGTG
  TTTGTTCTCT TAATCAGATG GGCCAACCTC AAACAATGCT CATCTATTCA TTAAAGCCAA
  GGCTAAATGA ATTCTACTTG CAAATTTCCC TTAGAGCAAC TTAAGAAGGT AAATTTGTTA
  ACATTTTTCT CACACAAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
ss46763163	NES10652131	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ
rs33031278					SNP	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46763163	NES10652131	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189726377 () rs orientation: forward

Symbol	Name	Function Class
Gm70453	predicted gene, 70453	within coordinates