rs33031431 SNP Detail

Summary

• ID
  rs33031431
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12328518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATTCACA CCAAATCAAA
  GCTGTCCCCT TGTAAGATGC ACACACAAAT GGAGGCTTCG AAGAATCGAC TTGAGGACTC
  CCTGTGAGGT GTCCTAGAAT CGGTCGCCCC TTCTCATAGG CGTTAGTAGA AAGGATGGTG
  TCGCATCAAA TCTCTGTGGA GATGAGGAAA GGTTCTTTGC CCAGCTTCAG CACACGCAGG
  R
  CACAGAGCAG CGCCATAAAC ACCAGCAGTT TATGACATGG CAAGAGGAAA AACAAGCAAG
  CAAACAAATA TGTAAGGGCC GAGCTGGTTT TAGAAGGCTT TTTGCCACCA AGGCAGCTTA
  TGCCTGGCTG GAGCCAGCAG TTGTCCTAGG TCCCACTCTC TTCTGAGGCA AGGTTCTGGG
  GGAGGAGACT CCTGAGCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46225261	mCV24317898	ABI	CRAMUS_MOUSE	f	SNP		A	G			G		G
ss60572187	NES16031350	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G		G	G	G	G	G	G	G	G	G
ss148676546	ENSMUSSNP146644	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33031431					SNP	A	A	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60572187	NES16031350	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12328518 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	307 bp upstream