rs33031568 SNP Detail

Summary

• ID
  rs33031568
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189665150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAGATCT TGGTTGGCCA
  AGGTCACGTC AGCTGCCTTC CCCTCTCAGT GATTTTGTGT ATATTTTATC TATAAAAGAC
  AAATTACTAT GAAAGGCTGG CAATATGGGT TTAAGAAAGG CAAAGAACAA AGTATGTTCT
  CTGCTCTTTG AATTTCTTAA AATTAAGTTC TTAAGACTCC TGCTGCTTGC CTTCAAACAA
  R
  CCACCTTGAA ACTACTCTGT GAAATGGGGT GAAAGGACAA ACCAAAGAGC TTCACTTATT
  TAAAAAAAAA TAATAAAGAA GAAGAAGAAG CAGCCCACGG GAGAGAGGAC ATTCAAGTCT
  CCCAGTAGCC ATACTTATTA GCTAAATTGA ATGCCTGTGG TGGGTCTCAT GGGGGCATGT
  GGCACCAGGC TCTTTGTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46762398	NES10655408	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33031568					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46762398	NES10655408	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189665150 () rs orientation: forward

Symbol	Name	Function Class
Gm70902	predicted gene, 70902	281 bp downstream
Rr425891	regulatory region 425891	414 bp proximal