rs33032541 SNP Detail

Summary

• ID
  rs33032541
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATAGAGT TTGCTTAAGG
  CCTGAGTTTG AGTCTCAGTC CTGGCACTGG AGACCCACGT AGCCTTAGGC TGGTCACTTT
  CCGTCCCTGT ACATTTTCTG TGAAGTTTGT TCCCATCTGT AAAACGAAGT TTCCAGGGAT
  AAGGATGGTG CTCGATGAGG CTACAGAAGC ATGGGGGAAG CCCTGAGTTC TGTCCCTAGT
  M
  GGGCATGCCC TAAACTAGGC ACGGTGGTGC ATGCCTGTAA TCTTAGGCCT CTGGAGGTTA
  AAGTGGGAGG ATCCGAAATT CAAGGTCATT CTTAGCTACC AGGCAGTTTT GAGGCTACCT
  TGGGATACAT GAAACTCAAC CTCTGAAATC TAGCCAAATA GATGCAGAGG AGATGAGAAA
  CCTCAGTGGT ACAGGGGCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46225378	mCV22853537	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss148546628	ENSMUSSNP4786021	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33032541					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647123 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	923 bp distal
Rr189485	regulatory region 189485	1278 bp proximal
Rr381636	regulatory region 381636	300 bp upstream
Tssr76064	transcription start site region 76064	599 bp downstream
Tssr76065	transcription start site region 76065	1192 bp upstream
Tssr76066	transcription start site region 76066	1216 bp upstream
Tssr76067	transcription start site region 76067	1231 bp upstream
Tssr76068	transcription start site region 76068	1248 bp upstream
Tssr76069	transcription start site region 76069	1320 bp upstream
Tssr76070	transcription start site region 76070	1470 bp upstream
Tssr76071	transcription start site region 76071	1519 bp upstream