rs33038277 SNP Detail

Summary

• ID
  rs33038277
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118595403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGA CGATACAAAA AGCCAGGGTG
  Y
  TGGCCTTGCT GTCCCTAGGC CTCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45228873	mCV22541612	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss147312055	ENSMUSSNP4700346	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320471665	CHEV_2_118590658	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33038277					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118595403 () rs orientation: forward

Symbol	Name	Function Class
Rr397216	regulatory region 397216	13 bp downstream
Rr563326	regulatory region 563326	1771 bp distal
Rr563327	regulatory region 563327	within coordinates
Rr563328	regulatory region 563328	226 bp distal
Rr563329	regulatory region 563329	384 bp proximal
Rr563330	regulatory region 563330	1569 bp proximal
Rr563331	regulatory region 563331	1909 bp proximal