rs33041292 SNP Detail

Summary

• ID
  rs33041292
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:29781044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTCTCCTA CTAATAGAAA
  AAAACAAAAC ACAAAATACA CATCATGTGG CAAATATATG AGGTAACTGG GTGCTTTTTT
  TCCTAAAATG AATATTTTTA TTACTTTAAG GCATATTTCC TCACTATTGC AATCTATACT
  GATTTCTAAA CATAGAAACA GTTAGCACCA AGTCTTTGTG GAATCTCTTT TAAAATGTGT
  R
  TATGGCTGTG CCTGTGTGTG TTTGGGGGCT GGTTGTCCAT GTCATTGTGA ATGTGCACAC
  ATGCATAGGG ACAGGATGTC AGCATTGAGG GTCCTCCACT ATTGCGTTTC ACCTCAGTTT
  TTTATTGACT CACTGTTTAG GCTCCTCGGT GGTTAGGCAG CAAGCCCCTT CAATGTTCCT
  GTTACACACC TCAGCATTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss49435400	NES12621731	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs33041292					SNP	A	A	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49435400	NES12621731	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:29781044 () rs orientation: forward

Symbol	Name	Function Class
Rr390510	regulatory region 390510	708 bp upstream