rs33041350 SNP Detail

Summary

• ID
  rs33041350
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:154304186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGATTCTA TGAAATGGCA AATGGGAGCT TCAAAAAAAT
  AACTTTAATA TCTTTAAGAG TAATTTCTAT TCGGTGTGTG TTTCCGCTGC ATGTTTGTGC
  W
  CTATATGAGA GCCTGGAGTC CATGGTTGTC AAGCTGAGGG CATCAGATCC CCTGGATTGC
  AGTTACGGAT ACTGTGTATC CTTCTGTGGG TGCTGGGGC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45229823	mCV22917646	ABI	CRAMUS_MOUSE	f	SNP		A	T	A
ss148031082	ENSMUSSNP4061493	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33041350					SNP	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154304186 () rs orientation: forward

Symbol	Name	Function Class
Cbfa2t2	CBFA2/RUNX1 translocation partner 2	Intron
Rr567835	regulatory region 567835	1950 bp distal
Rr567836	regulatory region 567836	1537 bp proximal