rs33042709 SNP Detail

Summary

• ID
  rs33042709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:17384053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCA GCAGTGGGGC TGGAGAGATG
  R
  CTCTAAGAGG TCAAGAGCAT GCAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46227078	mCV22518735	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss322521496	CHEV_8_17334037	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33042709					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:17384053 () rs orientation: forward

Symbol	Name	Function Class
Csmd1	CUB and Sushi multiple domains 1	within coordinates
Tssr80508	transcription start site region 80508	716 bp upstream