rs33045845 SNP Detail

Summary

• ID
  rs33045845
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144178081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTTACA CAACCCAGGA
  CCACCTGTCC AGGAATGACA CTGCCCACAG GGGCCCTTCC CCGGCAAAAA TTAACCAAGA
  CATGTACCCT ACAGATCTGC CTACTGGCCA ATCATATGAA AACTTTTTTT GAGACAGGAT
  TTCTCTTTGT AGCCTTGGCT ATCCTGGTTC TGTAGACCAG GCTGGGCTCG AACTCAGAGA
  R
  ATCTGCCTGC CCCTGCCTTC TGAGTGCTGG GATTAAAGGT GTGTCCTAGT GGGTAGGAAA
  GACGAGCAGA CAAACAGGGA ACAGGGCGAC CTAGAACCCC AAAGGACACA TCTCTAGTGA
  TTCACTTTCC ACAACCTGGC CCTGCCTCCA CAGTTCCACC ACGTCCAAGT ATTTCAAGAC
  ATATTCTCAG GAGTCTAGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45730274	mCV24556763	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss144609025	ENSMUSSNP6841778	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33045845					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144178081 () rs orientation: forward

Symbol	Name	Function Class
2900089D17Rik	RIKEN cDNA 2900089D17 gene	510 bp downstream