rs33046865 SNP Detail

Summary

• ID
  rs33046865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:41867050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCA GATGTGATTA CAGATCTAGT
  R
  ACAAGAAGAC TATCTAGTAA GACTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45730649	mCV25280830	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss148314831	ENSMUSSNP3951040	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33046865					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:41867050 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15822	CpG island 15822	1144 bp distal
Gm72243	predicted gene, 72243	within coordinates
Rab28	RAB28, member RAS oncogene family	1550 bp upstream
Rr399068	regulatory region 399068	1316 bp downstream
Rr610698	regulatory region 610698	1597 bp distal
Rr610699	regulatory region 610699	1165 bp distal
Rr610700	regulatory region 610700	718 bp distal
Tssr50841	transcription start site region 50841	1693 bp upstream
Tssr50842	transcription start site region 50842	1578 bp upstream
Tssr50843	transcription start site region 50843	1537 bp upstream