rs33049586 SNP Detail

Summary

• ID
  rs33049586
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:23733364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTTATCAGT GAGCACATAC CATGTATGTA CTTTTGTTGC CTCACTCAGG ATGATATTTT
  CTAGTTCCAT CCATTTGCAA AAGAATTTCA TAAATTCATT GTTTTTAATA GTTGAATAGT
  ACTCCCTTGT GAAAATGTAC CATATTTTCT GTATCTCTGT TAAAGGACAT CTGGGTTCTT
  TCCAGCTTTT GGGTATTATA AATAAGGCTG CTATGAACAT AGTGTAGCAT GTGTACTTGT
  TACATGTTGA AGCATCTTCT GGTTATATGC CCAGGAGTGG TATTGCTGGG TCCTCACTAT
  D
  TAGTACTATG TGCAATTTTC TGAGGAACTG CCAAACTGAT TTCCAGAGTG GATGCACCAT
  CTTGCGATCC CATCAACATT GGAGGAGTGT TCCTCTTTCT CCACATCCTA GCCAGCATCT
  GCTGTCACCT GAGTTTTTGA TCTTAGCCAT TCTGACTGGT GTGAGGTGGA ATCTCAGGGT
  TGTTTTAATT TGCATTTCCC TGATGACTAA GGATGCTAAA CATTTCTTTA GGTGTTTCTC
  AGCCATTCTG TATTCCTCAG TTGAGATTTC CTTGTTTTCC ACTGTACCCC ATTTTTAATA
                                                                   
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39487702	mCV24338704	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss39550956	mCV24338694	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33049586					SNP	?	?	G	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:23733364 () rs orientation: forward

Symbol	Name	Function Class
Gm7898	predicted gene 7898	1064 bp upstream
Rr329666	regulatory region 329666	1037 bp proximal