rs33050676 SNP Detail

Summary

• ID
  rs33050676
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189837432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTAAGGC CACATGAACC
  ATTTCTTTGA TCAGTTGCCT TGGGGACAAT ATTTTGTCAC AGCCACAGAG AAGTAACTAA
  TACAATGTCA TACACAACCA TTTTGTCTGA GGTCAGGGAA CAAGTTGTTT GGAGGCACCT
  TTGAGAGCTG AGCATATTCA AGCAGAGGAT ACAGCGTGGT GGGGTCCAGC CATTGTCATG
  R
  TGCTCCAGAG AGGATGTGGC TGAAATCCAC CAGAATTCAC CAAGGGATAT TGGAGGTATA
  ACTCCTAGTA GACCATACCA GCATGTCTGT GATTCCAAAG CAATATCTCC TCTCCTTTGT
  TTTTGTCTTT AAATTTATTT ATTTATTTAT TTATTTATTT ATTTATTTAT TTATTTATTT
  ATTTCAGACA CACCAGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss46765017	NES10647718	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33050676					SNP	G	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46765017	NES10647718	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189837432 () rs orientation: forward

Symbol	Name	Function Class
Rr425910	regulatory region 425910	1371 bp proximal