rs33052668 SNP Detail

Summary

• ID
  rs33052668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131405760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGATGCGGG AGGATGCTCT GAAAATGTCA TGTGCATGTC
  CTTGGTGCCT GGTTTATTCC TTGTTGCAGA TGGTGGGATG GTAGAAGCAA TGAAAGCCTC
  R
  GTTGTGTTGT GACATGAGCT TTCTTCTTCT CCCATCCTGC AGACCATTCA CTGAACTCGA
  TCCACAAGAG CTGAGCCCTT GGCAGGCAAA GTATGACTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45230381	mCV22780867	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss147607906	ENSMUSSNP5212018	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33052668					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131405760 () rs orientation: forward

Symbol	Name	Function Class
Adra1d	adrenergic receptor, alpha 1d	1557 bp upstream
Cpgi12295	CpG island 12295	699 bp distal
Gm14285	predicted gene 14285	within coordinates
Rr55657	regulatory region 55657	360 bp distal
Tssr26401	transcription start site region 26401	1338 bp upstream
Tssr26402	transcription start site region 26402	1305 bp upstream
Tssr26403	transcription start site region 26403	1067 bp upstream