rs33053164 SNP Detail

Summary

• ID
  rs33053164
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147783954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTGAGCT GATTAGGACC
  ACTTACCAGG GACTGTAGGG CCCAACTCCG GTGACACCTG AATGAGTAAG TGCCAGACAG
  CCACACAGAA TAATGTGAAT AACAGAGATG CGTCTGGTCC ACAGAACCAT GGAGCCCACA
  CAGTAGCGAG TTCTATAGAC ACATATATAT TCTAATGTGC ACAGCATACC TAAACTTAGT
  R
  AAGTGGACTC CATCCTAGGA CAGGACAGGA GTTTCACTGT GAGCTGGGCT GACTGATTTA
  ATCTTTAAGT TTTTATTCTG CATAAAAACA GCCTGGCAGA CCCCAAGCCT TGGAAACCTG
  ACCAGTAATT TCTTCTGAGA TTTTAAAAAT AATTTCCAGG ATTTTTTTTC CCTTCTGGTC
  TAGAAAACAA GGGTTCTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45231031	mCV24540175	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147906893	ENSMUSSNP1536235	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33053164					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147783954 () rs orientation: forward

Symbol	Name	Function Class
Rr566828	regulatory region 566828	507 bp proximal