rs33055920 SNP Detail

Summary

• ID
  rs33055920
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:83562705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGTGGCCT TGCTGGGCAT GTGCCGGAAG
  TCTTCCACTG TCCTGAGTTA CTCTGAAGTG TTGTCCTGCA AGGCCAGATT GCCCCTGCAT
  ACCTGGGGTG TAGAAGGATG TGGGGCTGTG AGCAAAGTCT CTAATGTTTA CATGCCTGCC
  R
  CTTCTGCACA TTCATGAGGT ATCTGAAACA TGAAAATCAT GGCCACGGAT AACTGCACTT
  AAATGAGCAC ATGTCAGTTG AAAAGATTTG GGTTTCAAAC AAGAGAAAGT ATTGTTAAGC
  TGGCCTGAGT TATAAGGAAT TGTAGCTCAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss47751130	NES11297318	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A		G	G		G
ss323045899	CHEV_9_83574259	CHEVERUD	SCREENING_POP	f	SNP								G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs33055920					SNP	G	G	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47751130	NES11297318	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:83562705 () rs orientation: forward

Symbol	Name	Function Class
Gm36120	predicted gene, 36120	within coordinates
Rr683929	regulatory region 683929	1421 bp proximal