rs33056628 SNP Detail

Summary

• ID
  rs33056628
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:83563000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAT GAATGAGCGC TAAGGGAACT
  Y
  GGCTTCTGAT ATTAGTTTTT CAGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	LG/J	SM/J	WSB/EiJ
ss47751138	NES11297322	PERLEGEN	MM_PANEL2	f	SNP			C	C	C			T
ss136705772	ENSMUSSNP2208632	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323045904	CHEV_9_83574554	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	LG/J	SM/J	WSB/EiJ
rs33056628					SNP	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47751138	NES11297322	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:83563000 () rs orientation: forward

Symbol	Name	Function Class
Gm36120	predicted gene, 36120	within coordinates
Rr683929	regulatory region 683929	1126 bp proximal